Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs138256648 | chr10:75541560 | G/GC | 0 | 214 | 15.88 | 18.72 | 2.47 | KM Plot |
| KIRP | rs138278759 | chr6:28055592 | A/AAG | 4.75E-7 | 212 | 16.43 | 16.68 | 9.77 | KM Plot |
| KIRP | rs138292284 | chr3:100022927 | TGATGTCTTTTAA/T | 4.46E-5 | 209 | 16.43 | 18.47 | 4.67 | KM Plot |
| KIRP | rs138298272 | chr16:4519800 | G/A | 4.09E-6 | 212 | 16.53 | 12.63 | 10.83 | KM Plot |
| KIRP | rs138377866 | chr15:24503980 | G/A | 0.000447 | 214 | 17 | 14.53 | 9.48 | KM Plot |
| KIRP | rs138395509 | chr5:79934294 | TTTA/T | 0.000105 | 214 | 18.65 | 14.83 | 9.77 | KM Plot |
| KIRP | rs138519211 | chr3:127635006 | C/CAAAGA | 0.000123 | 213 | 16.43 | 14.53 | 11.43 | KM Plot |
| KIRP | rs138542652 | chr22:18091639 | T/A | 4.24E-5 | 214 | 16.43 | 20.27 | 10.55 | KM Plot |
| KIRP | rs138613309 | chr21:30238627 | CA/C | 0.000397 | 212 | 17 | 15.07 | 1.03 | KM Plot |
| KIRP | rs138675268 | chr1:198126053 | A/T | 1.35E-6 | 213 | 14.83 | 31.97 | 13.65 | KM Plot |
| KIRP | rs138688201 | chr4:705538 | A/G | 0.000186 | 206 | 14.68 | 20.4 | 15.07 | KM Plot |
| KIRP | rs138696385 | chr14:59913091 | T/C | 0.000115 | 212 | 16.43 | 17.03 | 6.63 | KM Plot |
| KIRP | rs138709872 | chr5:145693664 | C/T | 8.03E-5 | 203 | 16.5 | 14.53 | 8.65 | KM Plot |
| KIRP | rs138754323 | chr16:20442117 | A/G | 0.000361 | 211 | 16.45 | 16.72 | 1.73 | KM Plot |
| KIRP | rs138787120 | chr15:24521350 | A/T | 8.91E-5 | 206 | 17.02 | 14.32 | 10.63 | KM Plot |